ABSTRACT
Background and Aim: The increasing emergence of antimicrobial resistance has intensified the search for safe and effective alternatives to antibiotics in livestock production. Probiotics derived from traditional fermented foods represent a promising strategy due to their adaptability and functional diversity. This study aimed to isolate and characterize a plateau-adapted strain of
Materials and Methods: The strain
Results:
Conclusion: The findings indicate that
Keywords: acid tolerance, antibiotic alternative,
INTRODUCTION
The Tibetan population has long practiced the production of yak yogurt using traditional fermentation techniques. This fermented product harbors a diverse microbial community [1], predominantly composed of lactic acid bacteria. The unique geographical and environmental conditions of the plateau play a crucial role in shaping this microbial diversity, enabling the enrichment of lactic acid bacteria with beneficial functional properties, including antioxidant activity [2, 3], antihypertensive effects [4], and prevention of intestinal disorders [5]. Beyond its cultural significance, the microbial diversity of traditional yak yogurt represents a valuable reservoir of novel probiotic strains that are naturally adapted to extreme environmental conditions.
The shift from traditional pastoral systems to intensive livestock farming has introduced new challenges in animal health management. The rapid expansion of intensive farming practices has increased the susceptibility of yaks to recurrent bacterial infections, leading to considerable economic losses in the yak production sector [6, 7]. Consequently, the identification of safe antibacterial alternatives in veterinary medicine has become a major research priority, particularly in response to concerns regarding antibiotic residues and the emergence of drug-resistant pathogens in livestock products. In this context, probiotics have gained increasing attention as effective antibiotic substitutes due to their ability to inhibit environmental pathogens and food spoilage microorganisms [8, 9].
Despite the recognized importance of probiotics as alternatives to antibiotics in livestock production, research focusing specifically on yak-adapted probiotic strains remains limited. Most existing studies have primarily investigated probiotic applications in conventional livestock such as poultry and swine, with comparatively little attention given to high-altitude ruminants such as yaks [17]. This is a critical limitation because yaks are uniquely adapted to extreme plateau environments characterized by hypoxia, low temperatures, and high ultraviolet radiation, conditions that significantly influence both host physiology and microbial ecology. Consequently, probiotic strains developed for lowland livestock may not exhibit optimal functionality or survival under such harsh environmental conditions.
Traditional fermented yak yogurt represents a rich and largely underexplored source of indigenous microorganisms with potential probiotic properties. However, systematic investigations into the isolation, characterization, and functional validation of these plateau-adapted strains remain scarce. In particular, there is a lack of integrated studies combining
Therefore, the present study was designed to isolate and characterize a plateau-adapted strain of
In addition, the study sought to validate the biological efficacy of the isolated strain through
MATERIALS AND METHODS
Ethical approval
The animal experiments conducted in this study were carried out in accordance with the guidelines for the care and use of laboratory animals and were approved by the Animal Care and Use Committee of Southwest Minzu University, Chengdu, China (Approval No. SWUN-MR2022-0058). The study involved oral administration of
All animals were housed under controlled environmental conditions with appropriate temperature, relative humidity, and a 12 h light/dark cycle, and had free access to standard feed and water. The animals were monitored daily throughout the experimental period for general health status, behavior, and any signs of adverse effects or toxicity. Particular attention was given to minimizing stress and discomfort during handling and gavage procedures.
At the end of the experimental period, animals were humanely euthanized using carbon dioxide inhalation in accordance with accepted ethical guidelines. Tissue collection was performed promptly following euthanasia to ensure sample integrity and to avoid unnecessary suffering.
The isolation of
Study period and location
This study was conducted from March 2022 to June 2022 at Southwest Minzu University, Chendu, China.
Instruments and reagents
Instruments and reagents used in this study are presented in Table 1.
Table 1. Main instruments and reagents.
| Instruments and reagents | Company |
|---|---|
| Electrophoresis power supply (DYY-3C) | Beijing Liuyi Instrument Factory |
| Polymerase chain reaction thermal cycler (Veriti™) | Thermo Fisher Scientific Inc |
| UV-Vis spectrophotometer (UV-6100) | Shanghai INESA Analytical Instrument Co., Ltd |
| Bio-electrophoresis image analysis system (FR-980A) | Shanghai Furi Technology Co., Ltd. |
| Microvolume nucleic acid/protein analyzer (NanoDrop) | Thermo Fisher Scientific Inc |
| MRS agar (M8330) | Solarbio |
| Gram stain kit | Solarbio |
| Oxford cup (Inner diameter 6 mm, Outer diameter 8 mm, Height 10 mm) | Chengdu Nuozhou Biotechnology Co., Ltd. |
| Antibiotic disks | Tianhe Microbial Reagent Co., Ltd. |
Isolation and identification of lactic acid bacteria
These colonies were then subjected to Gram staining and microscopic examination until a pure staining pattern was achieved. The genomic DNA was extracted using the phenol-chloroform method, and the DNA content and purity were assessed using an ultramicro nucleic acid protein analyzer (Bacterial cells were collected by centrifuging 1 mL of culture), the pellet was resuspended in 500 μL SDS lysis buffer containing proteinase K, and incubated at 60°C for 2 h; cooled to 20°C, an equal volume of phenol-chloroform-isoamyl alcohol (25:24:1) was added, and gently inverted to mix for 10 min, then centrifuged at 4°C, 10,000 ×
The PCR product was amplified using 16S rRNA universal primers (27F: 5´-AGAGTTTGATCCTGGCTCAG 3´, 1492R: 5´-GGTTACCTTGTTACGACTT-3´) and the extracted strain DNA as a template (Prepare the PCR amplification system with 12.5 µL 2 × T5 Super PCR Mix, 1 µL each of forward and reverse primers, 2 µL DNA template, and add ddH2O to a final volume of 25 µL. PCR program: initial denaturation at 98°C for 3 min; denaturation at 98°C for 10 s; annealing at 54°C for 10 s; extension at 72°C for 15 s; final extension at 72°C for 2 min; 30 cycles total; hold at 4°C. For agarose gel electrophoresis: use 1% agarose gel with 1× TAE as the running buffer to detect PCR products at 120 V, 200 mA for 25 min.). The desired bands were selected, and bidirectional sequencing was performed with the assistance of Tsingke Biotechnology (Chengdu, China). The obtained sequences were analyzed using BLAST analysis in MEGA 11 software (https://www.megasoftware.net), and phylogenetic trees were constructed using the obtained gene sequences.
Measurement of growth curves
Hemolysis test
A single colony of
Acid and bile salt resistance tests
Equation 1: Survival rate (%) = Number of live bacteria in the conditioned treatment/Number of untreated live bacteria × 100%
Antibiotics sensitivity test
A 106 CFU/mL bacterial suspension was spread onto LB agar plates. The bacterial susceptibility to antibiotics was then determined using the Kirby–Bauer disk diffusion method, and the diameter of the inhibition zones was measured. All experiments were performed in triplicate.
Determination of common yak-derived diarrhoeal pathogens
The bacteriostatic activity of
The indicator strain was incubated at 37°C for 12 h, the bacterial solution concentration was diluted to about 105 CFU/mL by continuous 10-fold gradient dilution, and 0.3 mL was applied to the nutrient AGAR (NA) plate. The Oxford Cup was lightly placed on the plate and pressed slightly to ensure there were no gaps between the Oxford Cup and the culture medium. Then, 0.2 mL of the supernatant of the probiotic strain was added and the mixture was allowed to stand for 8 h in the refrigerator at 4°C to diffusion. Afterward, it was placed in a constant temperature incubator at 37°C for 12 h to observe the results. All experiments were performed in triplicate.
Caco-2 cell adhesion
Caco-2 cells (Maintained in our laboratory) were cultured in sterile cell bottles with 5 mL of complete culture medium and incubated in a cell culture incubator at 37°C with 5% CO2 for 48 h. During passaging, the cells were allowed to adhere to the wall for approximately 80% of the time. Cells between passages 20–40 were used for all experiments to ensure consistent differentiation status.
The Caco-2 cells were digested with ethylenediaminetetraacetic acid (EDTA)-trypsin (0.25% trypsin-EDTA) for 1~2 min in the T25 flask, and the cell concentration was adjusted to 2×105 cells/mL with complete culture medium (Cell viability was assessed using trypan blue exclusion method (>95% viability was required for use). After 12 h of incubation, non-adherent cells were washed with sterile phosphate buffer saline (PBS). Finally, 1 mL of culture medium was added prior to the adhesion assay.
Bacterial suspension (1 mL) was inoculated into each well of a six-well plate (MOI = 100:1, bacteria to cells) and incubated for 12 h. Cells without bacteria were used as control, with three parallel controls conducted for each group and incubated for a period of 2 h at a temperature of 37°C and a CO2 concentration of 5%.
The unattached bacteria were rinsed with sterile PBS, treated with 0.4 mL of trypsin containing EDTA (0.25% trypsin-EDTA, 5 min at 37°C), and subsequently subjected to the addition of 1 mL of culture solution followed by repeated agitation. A gradient dilution of the cell-bacteria mixture was prepared, with varying dilution ratios chosen for the enumeration of viable bacteria. All experiments were performed in triplicate. The adhesion rate formula is shown in Equation 2.
Equation 2: Adhesion rate (%) = (adherent CFU / initial CFU) × 100%
Safety tests
Virulence gene assay: The six common virulence gene primers of Enterococcus were designed and synthesized by Sangon Biotech Co. Ltd., Shanghai, China. These primers were utilized in PCR experiments to amplify the target genes. The bacterial genome extraction procedure was conducted according to 1.4.2, and the specific primer information can be found in Table 2. The PCR amplification was performed using the following thermal cycling program: initial denaturation at 94°C for 5 min; followed by 30 cycles of denaturation at 94°C for 30 s, annealing for 30 s (Table 2), and extension at 72°C for 1 min; with a final extension at 72°C for 7 min, and holding at 4°C.
Table 2. Enterococcal virulence gene primer design.
| Target gene | Primer sequence (5’~3’) | Annealing temperature /℃ | Fragment size/BP |
|---|---|---|---|
| CylA-F | ACTCGGGGATTGATAGGC | 55 | 688 |
| CylA-R | GCTGCTAAAGCTGCGCTT | ||
| Esp-F | AATTGATTCTTTAGCATCTGG | 47 | 510 |
| Esp-R | AGATTCATCTTTGATTCTTGG | ||
| Asa1-F | GCACGCTATTACGAACTATGA | 51 | 375 |
| Asa1-R | TAAGAAAGAACATCACCACGA | ||
| EfaAfm-F | AACAGATCCGCATGAATA | 45 | 735 |
| EfaAfm-R | CATTTCATCATCTGATAGTA | ||
| GelE-F | TATGACAATGCTTTTTGGGAT | 48 | 213 |
| GelE-R | AGATGCACCCGAAATAATATA | ||
| Agg-F | CCAGTAATCAGTCCAGAAACAACC | 53 | 406 |
| Agg-R | TAGCTTTTTTCATTCTTGTGTTTGTT |
CylA = Cytolysin A, Esp = Enterococcal surface protein, asa1 = Aggregation substance of E. faecalis protein 1, EfaAfm = Endocarditis specific antigen of
Animal acute toxicity oral test: The present study was conducted in strict accordance with the requirements of the Animal Care and Use Committee of Southwest Minzu University, Chengdu, China (No. SWUN-MR2022-0058). Twenty male Kun Ming (KM) mice (20 ± 2 g) aged 8 weeks were obtained from Chengdu Dashuo Co. Ltd., Chengdu, China and randomly assigned to two groups (control group and a Treatment group), with 10 mice in each group. The Treatment group received a daily gavage of 1 × 109 CFU/mL bacterial suspension at 0.1 mL/10g body weight, while the control group received the same volume of MRS broth. The mice were housed in cages maintained at a temperature of 22°C ± 2°C, with a relative humidity of 55%–65% and a 12 h light/dark cycle. They were provided with ad libitum access to standard diet food and water. The mice were euthanized using the CO2 method after 7 days, and their hearts, livers, spleens, kidneys, and thymus were collected to determine organ indices. The visceral index formula is shown in Equation 3.
Equation 3: Visceral Index (%) = Organs weight (g) / Pre-autopsy weight of mice (g) × 100%
Determination of the effect of E. faecium SWUN5732 on the body weight of mice
Thirty male KM mice (20 ± 2 g) aged 8 weeks were obtained from Chengdu Dashuo Co. Ltd. placed in a cage at 22°C ± 2°C and 55%–65% relative humidity (RH) and under a 12 h/12 h light/dark cycle, and were given free access to standard diet food and water. The mice were randomly assigned to three groups (control, Low-dose, and High-dose groups), with 10 mice in each group. Based on the outcomes of the pre-test, the High-dose group received an administration of 0.2 mL of 5 × 109 CFU of
Determination of sIgA in the intestinal mucosa
Mice were selected for the experiment using a random sampling method, with three mice chosen from each group at 7, 14, and 21 d. Following euthanasia, the jejunum and ileum mucosa were harvested, and 1 g of intestinal tissue was ground with 1 mL of sterile PBS.
The mixture was then centrifuged at a speed of 6,000×
Statistical analysis
All graphs were generated using GraphPad Prism version 8.0.2 (GraphPad Software Inc., San Diego, CA, USA). Statistical analyses were performed with SPSS version 20.0 (Chicago, IL, USA). Data normality was assessed using the Shapiro-Wilk test prior to analysis. One-way analysis of variance was performed to evaluate significant differences among groups, followed by Tukey’s post-hoc test for multiple comparisons. Data are expressed as the mean ± SD with n = 3 for each group. Statistical significance was set at p < 0.05. Bars with different lowercase letters within the same group indicate a significant difference (p < 0.05).
Bacterial species collection information
The sequence of
RESULTS
Morphological characteristics of the colony, 16S rRNA gene sequence analysis, and phylogenetic tree construction
The colony morphology exhibited elevated white circular colonies featuring clearly visible calcium soluble circles that developed on the surface of the calcium carbonate-containing medium (Figure 1-A). Under microscopic examination, the colonies displayed a round or oval shape, consisting of either individual or paired Gram-positive cocci (Figure 1-B).
Figure 1. Isolation and identification of SWUN5732 strain. (A) Colony morphology and calcium dissolving circle. (B) Microscopic examination (10× and 100×).
The agar gel electrophoresis results revealed that the amplification fragment of the
Figure 2. (A) Electrophoresis identification of PCR products amplifying Lactobacillus 16S rRNA sequence. M: DL2000 bp; S: SWUN5732 16S rRNA PCR product; N: Negative control. (B) SWUN5732 phylogenetic tree.
Determination of growth curves
The horizontal coordinate for the growth curves was selected as the incubation time, while the vertical coordinate was designated as OD600 nm. Strain
Acid- and bile salt-tolerant
The strain
Figure 3. (A) Growth curve of
Hemolysis test
Using
Figure 4. Hemolysis test results. (A)
Determination of common yak-derived diarrhoeal pathogens
Figure 5. Diameter of the zone of inhibition.
Table 3. Inhibition effect of SWUN5732 on intestinal pathogens of yak origin.
| Indicating strain | Bacteriostatic zone diameter (mm) |
|---|---|
| Yak hemolytic | 32 ± 1 |
| Yak hemolytic | 31 ± 1.5 |
| Yak hemolytic | 28 ± 0.75 |
| 23 ± 1.5 | |
| 37 ± 0.6 | |
| 34 ± 1.2 | |
| Salmonella SWUN3712 | 36 ± 1.6 |
| 18 ± 0.5 | |
| 23 ± 0.7 | |
| 22 ± 1.2 | |
| 21 ± 0.6 |
Antibiotic sensitivity test
Table 4. Antibiotic susceptibility test results of
| Antibiotic name | Susceptible (S) | Intermediate (I) | Resistant (R) | Bactericidal zone diameter (mm) |
|---|---|---|---|---|
| Ampicillin (10 pg per tablet) | ≥17 | --- | ≤16 | 25 (S) |
| Gentamicin (10 µg per tablet) | ≥15 | 13 ≤ I ≤ 14 | ≤12 | 16 (S) |
| Tetracycline (30 µg per tablet) | ≥19 | 15 ≤ I ≤ 18 | ≤14 | 22 (S) |
| Minocycline (30 mg per tablet) | ≥19 | 15 ≤ I ≤ 18 | ≤14 | 25 (S) |
| Ciprofloxacin (5 µg per tablet) | ≥21 | 16 ≤ I ≤ 20 | ≤15 | 22 (S) |
| Norfloxacin (10 pg per tablet) | ≥17 | 13 ≤ I ≤ 16 | ≤12 | 22 (S) |
| Chloramphenicol (30 µg per tablet) | ≥18 | 13 ≤ I ≤ 17 | ≤12 | 22 (S) |
| Vancomycin (30 μg per tablet) | ≥17 mm | --- | <17 | 19 (S) |
Adherence to Caco-2 cells
By comparing the number of colonies before and after adhesion in three parallel groups of samples, the adhesion rate of
Table 5. Cell adhesion rate results.
| Group | Initial colony count (CFU/mL) | The number of colonies recovered after adhesion (CFU/mL) | Adhesion rate (%) |
|---|---|---|---|
| Repetition Group 1 | 5.2 × 10⁸ | 1.46 × 10⁸ | 28.15 |
| Repetition Group 2 | 5.2 × 10⁸ | 1.52 × 10⁸ | 29.23 |
| Repetition Group 3 | 5.2 × 10⁸ | 1.56 × 10⁸ | 30.04 |
| Average ± standard deviation | --- | --- | 29.14 ± 0.96 |
Safety determination
After identification by PCR, only endocarditis antigen (
Figure 6. (A) Enterococcal virulence gene results. DL, M: Marker; AG: Agg; GE: GelE; ESP: Esp; ASA: asa1; EF: efaAfm; CY: cylA: PCR product; N: negative control. (B) Results of organ index.
In the investigation of acute toxicity of an oral bacterial solution in animals, it was observed that none of the mice experienced mortality, and no noteworthy abnormalities were detected. Dissection revealed no significant differences in organ color and size in the blank mice compared to the experimental group and no lesions. The organ weights of the mice were measured, and there was no significant difference in the organ index between the Treatment group and the broth control group (p > 0.05) (Figure 6 B).
Measurement of daily weight gain in mice
Following a 7 d intragastric administration of
Table 6. Weight gain experiment results of SWUN5732 in mice (body weight/g).
| Gastric filling volume (CFU/mL) | Day 1 | Day 7 | Day 14 | Day 21 |
|---|---|---|---|---|
| control | 31.46 ± 1.99 | 35.69 ± 2.19 | 41.95 ± 3.31 | 42.97 ± 0.92 |
| Low-dose | 33.08 ± 1.84 | 36.79 ± 2.96 | 42.94 ± 3.45 | 43.06 ± 2.79 |
| High-dose | 32.20 ± 1.31 | 37.55 ± 2.99 | 44.13 ± 4.87 | 45.16 ± 4.16 |
Values are means ± SEM,
* indicates significant difference (p < 0.05),
** indicates highly significant difference (
Determination of sIgA in intestinal mucosa
After a period of 7 d of administering the
Figure 7. Intestinal sIgA secretion.* indicates significant difference (p < 0.05), ** indicates highly significant difference (p < 0.01).
DISCUSSION
Probiotic potential and identification of E. faecium SWUN5732
The escalating prevalence of antimicrobial resistance has necessitated the development of safe and effective alternatives to antibiotics in animal production. Probiotics, particularly lactic acid bacteria, have emerged as promising candidates due to their multifaceted beneficial effects on host health [18]. In this study,
Safety evaluation and virulence gene assessment
Safety assessment remains paramount for enterococcal probiotics given the documented pathogenic potential of certain strains, particularly
Adaptation to extreme environments and growth characteristics
Traditional fermented dairy products represent valuable reservoirs for isolating probiotic strains with unique ecological adaptations. The Tibetan Plateau presents extreme environmental conditions, including high-altitude, hypoxia, intense ultraviolet radiation, and low temperatures, which impose selective pressures on indigenous microorganisms [24, 25]. Consequently, microorganisms derived from such environments often possess distinctive physiological characteristics that may confer competitive advantages for applications in high-altitude livestock systems.
Gastrointestinal tolerance and probiotic viability
Probiotics that exhibit favorable performance must possess the ability to endure the acidic conditions and presence of bile salts within the gastrointestinal tract [26]. The gastric environment presents significant challenges, with pH values frequently dropping below 3.0 during fasting states, while bile salts in the small intestine can reach concentrations of 0.3–3.0 g/L [27].
Antimicrobial activity against yak-derived pathogens
The antimicrobial efficacy of
Adhesion ability and intestinal colonization
Intestinal adhesion represents a prerequisite for effective probiotic colonization and competitive exclusion of pathogens [30]. The adhesion rate of
Immunomodulatory effects and sIgA response
The immunomodulatory capacity of probiotics represents an increasingly recognized mechanism underlying their health-promoting effects [33, 34]. Our study demonstrated that oral administration of
Growth performance and physiological benefits
The concomitant enhancement of body weight gain in treated mice further supports the physiological relevance of SWUN5732 supplementation. The average weight increase of 2.19 g in the high-dose group relative to controls, particularly evident during the rapid growth phase (days 7–14), likely reflects improved nutrient utilization efficiency and reduced metabolic costs associated with immune activation and pathogen defense [35]. This growth-promoting effect, achieved without antibiotic exposure, aligns with the strategic objective of reducing antimicrobial use in livestock production while maintaining animal performance [15, 36–38].
Study limitations and future perspectives
Several limitations of this study should be acknowledged. The murine model, while informative for preliminary safety and efficacy assessment, does not fully replicate the anatomical and physiological characteristics of the yak digestive system, particularly the rumen and its associated microbial ecosystem. And, the duration of the intervention (21 d) provides limited insight into long-term colonization dynamics and sustained immunomodulatory effects. The antimicrobial activity was assessed using
CONCLUSION
The present study demonstrated that
Safety assessment confirmed the absence of major virulence determinants except
From a practical perspective, the ability of
A major strength of this study lies in the comprehensive evaluation of probiotic potential through both
Overall,
DATA AVAILABILITY
The supplementary data can be made available from the corresponding author upon request.
AUTHORS’ CONTRIBUTIONS
MY: Writing–original draft; Formal analysis; Investigation; Visualization. XBL: Writing–original draft; Methodology; Validation; Resources. LJR: Conceptualization; Supervision; Project administration; Funding acquisition. XR: Data curation; Software; Formal analysis; Investigation. XDL: Methodology; Investigation; Resources; Validation. DCC: Methodology; Writing – review and editing; Funding acquisition; Supervision; Project administration. FLY: Software; Data curation; Formal analysis; Visualization. JF: Writing – review and editing; Conceptualization; Supervision; Resources. All authors read and approved the final manuscript.
COMPETING INTERESTS
The authors declare that they have no competing interests.
PUBLISHER’S NOTE
Veterinary World remains neutral with regard to jurisdictional claims in the published institutional affiliations.
ACKNOWLEDGMENTS
This work was supported by the National Natural Science Foundation of China (No. 32202871), Scientific and Technological Innovation Teamfor Qinghai-Tibetan Plateau Research in Southwest Minzu University (No. 2024CXTD08), and the Sichuan Science and Technology Program for Rural Revitalization under Grant (No. 2024ZHXC0003), and Aba Vocational College Research and Innovation Team (No. 2024T01).
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