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65 articles matching “phylogenetic analysis”

16
Research Article16 Jul 2020Vol. 13 · Issue 7

Sequencing and phylogenetic analysis of infectious bronchitis virus variant strain from an outbreak in egg-layer flocks in Baghdad, Iraq

Furkan Alaraji

We aimed to detect the currently circulating strains of IB virus that cause frequent outbreaks in egg layers despite the use of vaccination against the virus

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17
Research Article13 Nov 2019Vol. 12 · Issue 11

Application of immunofluorescence assay and nested polymerase chain reaction for query fever diagnosis in animal handlers of Puducherry, South India, and phylogenetic analysis based on IS1111 repetitive gene element

Selvaraj Stephen

This report describes our study on the serological as well as molecular evidence of QF in animal handlers from Puducherry and surrounding Tamil Nadu

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18
Research Article27 Jun 2019Vol. 12 · Issue 6

Genetic variation and phylogenetic analysis of Indonesian indigenous catfish based on mitochondrial cytochrome oxidase subunit III gene

Rini Widayanti

This study aimed to analyze the genetic variation and phylogenetic reconstruction of Indonesian indigenous catfish using mitochondrial cytochrome oxidase subunit III sequences

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19
Research Article04 Sep 2018Vol. 11 · Issue 9

Clinical, molecular detection and phylogenetic analysis study of local foot-and-mouth disease virus in Al-Qadisiyah province of Iraq

Muthanna Hadi Hussain

This study was directed during an outbreak of suspected foot-and-mouth disease (FMD) in cattle in Al-Qadisiyah province, Iraq 2016

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20
Research Article24 Sep 2026Vol. 19 · Issue 9

Serological and molecular detection and phylogenetic characterization of Taylorella equigenitalis in horses in Iraq

Hasanain A. J. Gharban

This study aimed to determine the serological and molecular occurrence of T. equigenitalis in horses in Iraq, evaluate associations with clinical and epidemiological factors, and characterize PCR-positive isolates using sequencing and phylogenetic analysis.

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21
Research Article20 Jul 2026Vol. 19 · Issue 7

Molecular detection, characterization, and cross-species circulation of feline and canine parvoviruses in Gujarat, India: Emergence of a novel canine parvovirus-2c variant and enhanced diagnostic sensitivity of quantitative polymerase chain reaction

Arunkumar C. Patel

This study aimed to determine the prevalence of FPV and CPV infections among cats and dogs in Gujarat, India, compare the diagnostic performance of rapid antigen testing (RAT), conventional polymerase chain reaction (PCR), and quantitative PCR (qPCR), charact…

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22
Research Article17 Jul 2025Vol. 18 · Issue 7

First molecular phylogenetic and serological insights into Listeria monocytogenes infection in aborted ewes in Iraq: A cross-border comparative analysis

Hasanain A. J. Gharban

This study aimed to (1) estimate the seroprevalence of L. monocytogenes in recently aborted ewes, (2) evaluate the association between seropositivity and clinical indicators, and (3) perform molecular detection and phylogenetic analysis of polymerase chain re…

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23
Research Article18 Sep 2026Vol. 19 · Issue 9

Epidemiological and molecular characterization of recombinant clade 2.5 lumpy skin disease virus in beef cattle across Thailand

Alongkorn Amonsin

This study investigated LSDV occurrence and associated animal-level factors in Thai beef cattle during the 2022 outbreaks and characterized circulating viruses using molecular and phylogenetic analyses.

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24
Research Article08 Aug 2026Vol. 19 · Issue 8

Emergence of canine parvovirus-2c in domestic cats and adaptive evolution of the NS1 gene: Molecular epidemiology of feline parvoviruses in Northern Vietnam (2022–2025)

Jatuporn Rattanasrisomporn and Hieu Van Dong

This study investigated the epidemiological, molecular, and evolutionary characteristics of feline parvoviruses circulating in domestic cats in Northern Vietnam between 2022 and 2025.

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25
Research Article14 Jul 2026Vol. 19 · Issue 7

First report of molecular genotyping, pathotyping, and histopathological characterization of lentogenic genotype II Newcastle disease virus circulating in young ostrich flocks in Egypt

Ibrahim Eldaghayes

This study investigated the prevalence, molecular characteristics, pathotype, phylogenetic relationships, and histopathological changes associated with NDV circulating in young ostrich flocks in Egypt.

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26
Research Article10 Jul 2026Vol. 19 · Issue 7

Molecular detection, genetic characterization, and phylogenetic relationships of Theileria orientalis in cattle and associated ticks from Wasit Province, Iraq

Hasanain A. J. Gharban

This study aimed to determine the molecular prevalence of T. orientalis in cattle and their naturally infesting ticks in Wasit Province, Iraq; identify host-associated risk factors; and characterize the genetic diversity and phylogenetic relationships of loca…

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27
Research Article27 May 2026Vol. 19 · Issue 5

Molecular detection and VP1-based phylogenetic characterization of Foot-and-mouth disease virus serotype O circulating in cattle in Aceh, Indonesia

M. Daud AK

This study aimed to detect FMDV in clinically affected cattle in Aceh, Indonesia, using serological and molecular approaches and to characterize the phylogenetic relationship of the detected virus based on the VP1 gene.

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28
Research Article03 May 2026Vol. 19 · Issue 5

Molecular diversity and phylogenetic characterization of the invA gene in non-typhoidal Salmonella from domestic animals and wildlife in Zambia

Charles Miyanda Mubita

This study aimed to characterize nucleotide diversity and phylogenetic relationships of the invA gene among Salmonella isolates obtained from domestic animals and free-ranging wildlife in selected regions of Zambia.

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29
Research Article12 Apr 2026Vol. 19 · Issue 4

Molecular prevalence and phylogenetic characterization of Plasmodium juxtanucleare in Thai native chickens and fighting cocks across Kalasin Province, Northeast Thailand

Sirikanda Thanasuwan

This study aimed to determine the molecular prevalence of Plasmodium spp., compare infection rates between free-range Thai native chickens and intensively managed fighting cocks, and analyze the phylogenetic relationships of circulating parasites using the mi…

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30
Research Article12 Apr 2026Vol. 19 · Issue 4

Molecular identification and phylogenetic profiling of African swine fever virus in Indonesia during 2021–2025 based on the B646L (p72) gene

Wiwiek Tyasningsih

This study aimed to detect ASFV circulation in Indonesia between 2021 and 2025 and to characterize its phylogenetic relationships using partial sequencing of the B646L (p72) gene.

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